MLOC_63570 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.0407122000.026705
LEAShoots from the seedlings (10 cm shoot stage)0.052423000.0462191
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)1.872981.086671.9331.3525
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.07202170.06904210.1311840.108007
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_63570






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63570.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_63570.1CUST_8613_PI427708083AvailableAvailablecontig_47722 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g01510.1 -2 6e-154 447 257/362 (71%) 13102.m00071 protein lactate/malate dehydrogenase, putative, expressed
TAIR PP10 AT4G17260.1 -2 8e-128 378 200/334 (60%) Lactate/malate dehydrogenase family protein | chr4:9674057-9675309 FORWARD LENGTH=353