MLOC_63556 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.633720.472823.778117.6964
LEAShoots from the seedlings (10 cm shoot stage)77.572551.375250.026850.9522
INF1Young developing inflorescences (5mm)20.817110.55187.8015410.6849
INF2Developing inflorescences (1-1.5 cm)11.850311.913914.068312.5535
ROORoots from the seedlings (10 cm shoot stage)13.332620.841918.905722.9406
NODDeveloping tillers at six leaf stage, 3rd internode183.028157.27229.713592.62
CAR5Developing grain, bracts removed (5 DPA)153.613146.922152.341136.946
CAR15Developing grain, bracts removed (15 DPA)7.277677.619378.6837215.1588



CDS Structure of MLOC_63556






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63556.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_63556.4CUST_14574_PI427708080AvailableAvailablecontig_47704 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g20380.1 -2 0.0 721 353/386 (91%) 13103.m02439 protein CAMK_KIN1/SNF1/Nim1_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10 AT5G21326.1 -2 0.0 557 265/376 (70%) Ca2+regulated serine-threonine protein kinase family protein | chr5:7218081-7221743 FORWARD LENGTH=439