- Predicted Gene MLOC_63556
MLOC_63556 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 13.6337 | 20.4728 | 23.7781 | 17.6964 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 77.5725 | 51.3752 | 50.0268 | 50.9522 |
INF1 | Young developing inflorescences (5mm) | 20.8171 | 10.5518 | 7.80154 | 10.6849 |
INF2 | Developing inflorescences (1-1.5 cm) | 11.8503 | 11.9139 | 14.0683 | 12.5535 |
ROO | Roots from the seedlings (10 cm shoot stage) | 13.3326 | 20.8419 | 18.9057 | 22.9406 |
NOD | Developing tillers at six leaf stage, 3rd internode | 183.028 | 157.27 | 229.713 | 592.62 |
CAR5 | Developing grain, bracts removed (5 DPA) | 153.613 | 146.922 | 152.341 | 136.946 |
CAR15 | Developing grain, bracts removed (15 DPA) | 7.27767 | 7.61937 | 8.68372 | 15.1588 |
CDS Structure of MLOC_63556
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_63556.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g20380.1 |
-2 |
0.0 |
721 |
353/386 (91%) |
13103.m02439 protein CAMK_KIN1/SNF1/Nim1_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
TAIR PP10 |
AT5G21326.1 |
-2 |
0.0 |
557 |
265/376 (70%) |
Ca2+regulated serine-threonine protein kinase family protein | chr5:7218081-7221743 FORWARD LENGTH=439 |