MLOC_63550 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.08821.671142.117311.98206
LEAShoots from the seedlings (10 cm shoot stage)1.923843.857115.529263.31146
INF1Young developing inflorescences (5mm)0.0170071000.0153257
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)8.708327.247613.94698.35681
NODDeveloping tillers at six leaf stage, 3rd internode0.07241970.01603740.1354490.123275
CAR5Developing grain, bracts removed (5 DPA)1.438741.007050.6405121.10774
CAR15Developing grain, bracts removed (15 DPA)0.1082560.1265520.04428990.277995



CDS Structure of MLOC_63550






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63550.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_63550.2CUST_14573_PI427708080AvailableAvailablecontig_47699 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g35650.1 -2 0.0 699 387/526 (74%) 13106.m03681 protein reticuline oxidase-like protein precursor, putative, expressed
TAIR PP10 AT4G20860.1 -2 1e-122 383 216/460 (47%) FAD-binding Berberine family protein | chr4:11172726-11174318 FORWARD LENGTH=530