- Predicted Gene MLOC_63540
MLOC_63540 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 17.526 | 30.1382 | 26.6753 | 26.6136 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 25.3977 | 26.8147 | 23.008 | 22.1643 |
| INF1 | Young developing inflorescences (5mm) | 58.4401 | 52.9374 | 46.829 | 44.6804 |
| INF2 | Developing inflorescences (1-1.5 cm) | 40.5381 | 42.5854 | 39.2463 | 44.704 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.36006 | 21.9944 | 18.8558 | 25.2187 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.80106 | 6.22288 | 10.4008 | 24.4523 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 27.5047 | 26.8758 | 27.4155 | 26.4748 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 11.1279 | 8.55281 | 8.96062 | 22.1469 |
CDS Structure of MLOC_63540
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_63540.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g29630.1 |
-1 |
0.0 |
1394 |
687/871 (79%) |
13109.m02938 protein NOL1/NOP2/sun family protein, putative, expressed |
| TAIR PP10 |
AT2G22400.1 |
-1 |
0.0 |
842 |
459/852 (54%) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr2:9504823-9508788 REVERSE LENGTH=808 |