- Predicted Gene MLOC_63532
MLOC_63532 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_63532_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_63532_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.141387 | 0 | 0 | 0.123278 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.349943 | 0.294867 | 0.135537 | 0.226508 |
INF1 | Young developing inflorescences (5mm) | 0.320548 | 0.600554 | 1.04247 | 0.616201 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.2199 | 1.00981 | 2.22108 | 2.36241 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.447902 | 0.591254 | 0.305558 | 0.657772 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.107776 | 0.333235 | 0.182619 | 0.941619 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.33429 | 0.360225 | 0.466066 | 0.408788 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.68655 | 2.17384 | 2.68798 | 6.33681 |
CDS Structure of MLOC_63532
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_63532.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g53220.1 |
-3 |
1e-93 |
291 |
187/252 (74%) |
13101.m05575 protein HSF-type DNA-binding domain containing protein, expressed |
TAIR PP10 |
AT3G24520.1 |
-3 |
2e-48 |
173 |
87/182 (48%) |
| Symbols: AT-HSFC1, HSFC1 | heat shock transcription factor C1 | chr3:8941455-8942531 FORWARD LENGTH=330 |