MLOC_63531 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.482333.037326.284628.6544
LEAShoots from the seedlings (10 cm shoot stage)37.453240.469831.538730.0309
INF1Young developing inflorescences (5mm)71.061365.217454.320859.4583
INF2Developing inflorescences (1-1.5 cm)47.70545.482141.995956.6174
ROORoots from the seedlings (10 cm shoot stage)9.0295526.561823.895931.3753
NODDeveloping tillers at six leaf stage, 3rd internode2.854050.977154.451824.86047
CAR5Developing grain, bracts removed (5 DPA)25.00627.944529.165831.6354
CAR15Developing grain, bracts removed (15 DPA)10.90812.91678.3888128.9733



CDS Structure of MLOC_63531






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63531.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_63531.1CUST_12924_PI427708083AvailableAvailablecontig_47670 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g32350.2 -1 4e-22 91 42/49 (86%) 13107.m03274 protein WD domain, G-beta repeat domain containing protein, expressed
TAIR PP10 AT1G29320.1 -1 1e-11 62 28/47 (60%) Transducin/WD40 repeat-like superfamily protein | chr1:10255355-10258238 FORWARD LENGTH=468