MLOC_63513 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains724.101659.893775.32584.072
LEAShoots from the seedlings (10 cm shoot stage)503.146259.381264.794262.608
INF1Young developing inflorescences (5mm)264.187255.479309.351183.624
INF2Developing inflorescences (1-1.5 cm)211.351175.653154.238175.904
ROORoots from the seedlings (10 cm shoot stage)370.762391.761338.173380.882
NODDeveloping tillers at six leaf stage, 3rd internode1359.251072.92976.2862973.12
CAR5Developing grain, bracts removed (5 DPA)273.582250.358268.408212.571
CAR15Developing grain, bracts removed (15 DPA)48.96544.389335.659882.5656



CDS Structure of MLOC_63513






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63513.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_63513.1CUST_8609_PI427708083AvailableAvailablecontig_476558 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g60090.2 +1 1e-26 103 49/53 (92%) 13103.m06596 protein methylenetetrahydrofolate reductase, putative, expressed
TAIR PP10 AT2G44160.1 +1 1e-23 94 44/53 (83%) | Symbols: MTHFR2 | methylenetetrahydrofolate reductase 2 | chr2:18262301-18265185 FORWARD LENGTH=594