MLOC_63510 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1276790.2522610.1126890.194501
LEAShoots from the seedlings (10 cm shoot stage)0.026599000.0244922
INF1Young developing inflorescences (5mm)1.38822.622291.568351.70006
INF2Developing inflorescences (1-1.5 cm)0.7600480.7202010.272280.714456
ROORoots from the seedlings (10 cm shoot stage)0.03679880.1434230.04676040.136556
NODDeveloping tillers at six leaf stage, 3rd internode1.467123.166090.1498186.52409
CAR5Developing grain, bracts removed (5 DPA)98.385473.351673.205480.1277
CAR15Developing grain, bracts removed (15 DPA)0.3930920.3497530.492711.00675



CDS Structure of MLOC_63510






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63510.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375659NoneNoneNoneNone
MLOC_63510.1CUST_4801_PI427708080AvailableAvailablecontig_47654 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g39020.1 +1 0.0 667 404/773 (52%) 13107.m04041 protein OsSub53 - Putative Subtilisin homologue, expressed
TAIR PP10 AT3G14067.1 +1 5e-161 495 314/785 (40%) Subtilase family protein | chr3:4658421-4660754 REVERSE LENGTH=777