MLOC_63506 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.176119.112519.964121.2747
LEAShoots from the seedlings (10 cm shoot stage)13.02726.745066.527558.28
INF1Young developing inflorescences (5mm)49.11244.213845.058540.2643
INF2Developing inflorescences (1-1.5 cm)30.999628.607430.277934.8278
ROORoots from the seedlings (10 cm shoot stage)3.8113310.837213.667414.6015
NODDeveloping tillers at six leaf stage, 3rd internode0.2176130.1572930.4773240.860374
CAR5Developing grain, bracts removed (5 DPA)12.311812.07213.216913.4202
CAR15Developing grain, bracts removed (15 DPA)2.42942.050472.391885.54042



CDS Structure of MLOC_63506






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63506.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_63506.1CUST_14564_PI427708080AvailableAvailablecontig_476524 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g40110.1 +3 1e-136 400 224/306 (73%) 13101.m04103 protein ZOS1-11 - C2H2 zinc finger protein, expressed
TAIR PP10 AT2G19385.1 +3 3e-65 214 138/311 (44%) zinc ion binding | chr2:8387149-8388581 FORWARD LENGTH=275