- Predicted Gene MLOC_63505
MLOC_63505 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 44.3413 | 36.2147 | 35.728 | 41.9226 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 31.7518 | 13.4468 | 14.8503 | 17.3278 |
| INF1 | Young developing inflorescences (5mm) | 27.9131 | 25.9982 | 28.6411 | 25.5896 |
| INF2 | Developing inflorescences (1-1.5 cm) | 25.8085 | 23.3515 | 28.5775 | 30.5559 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 33.3748 | 34.5553 | 24.0521 | 43.2692 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 12.1271 | 16.5821 | 5.46427 | 48.8194 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 20.03 | 18.1559 | 16.6571 | 19.6966 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.62553 | 7.25742 | 9.28167 | 21.2828 |
CDS Structure of MLOC_63505
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_63505.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g31970.1 |
+2 |
0.0 |
712 |
461/535 (86%) |
13109.m03170 protein 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed |
| TAIR PP10 |
AT1G76490.1 |
+2 |
0.0 |
595 |
375/532 (70%) |
| Symbols: HMG1, HMGR1, AtHMGR1 | hydroxy methylglutaryl CoA reductase 1 | chr1:28695801-28698206 FORWARD LENGTH=642 |