MLOC_63492 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains25.964319.795223.143722.6155
LEAShoots from the seedlings (10 cm shoot stage)18.14425.438331.190421.2984
INF1Young developing inflorescences (5mm)15.844517.533516.114314.0472
INF2Developing inflorescences (1-1.5 cm)15.494515.758614.22317.1133
ROORoots from the seedlings (10 cm shoot stage)22.031419.072416.07323.4576
NODDeveloping tillers at six leaf stage, 3rd internode21.2426.238835.463697.0276
CAR5Developing grain, bracts removed (5 DPA)16.221616.531915.867416.2595
CAR15Developing grain, bracts removed (15 DPA)4.168544.406924.2135710.1147



CDS Structure of MLOC_63492






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63492.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358483NoneNoneNoneNone
MLOC_63492.1CUST_4800_PI427708080AvailableAvailablecontig_47641 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g45390.2 +1 2e-111 337 166/180 (92%) 13101.m04654 protein HD domain containing protein 2, putative, expressed
TAIR PP10 AT1G26160.1 +1 6e-98 301 148/174 (85%) Metal-dependent phosphohydrolase | chr1:9044784-9046945 REVERSE LENGTH=258