MLOC_63484 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains20.798223.577123.786421.974
LEAShoots from the seedlings (10 cm shoot stage)27.713222.067218.616519.0558
INF1Young developing inflorescences (5mm)45.307844.460540.200734.5778
INF2Developing inflorescences (1-1.5 cm)52.640245.131344.885848.9166
ROORoots from the seedlings (10 cm shoot stage)12.408324.142119.029924.8737
NODDeveloping tillers at six leaf stage, 3rd internode14.270119.111430.32567.5354
CAR5Developing grain, bracts removed (5 DPA)30.126826.4427.885625.359
CAR15Developing grain, bracts removed (15 DPA)12.083611.939510.866824.8193



CDS Structure of MLOC_63484






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63484.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_63484.2CUST_14560_PI427708080AvailableAvailablecontig_47634 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g61560.1 -3 0.0 884 479/690 (69%) 13103.m06778 protein expressed protein
TAIR PP10 AT3G16810.1 -3 3e-172 514 302/653 (46%) | Symbols: APUM24, PUM24 | pumilio 24 | chr3:5723436-5727539 REVERSE LENGTH=641