MLOC_63480 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.024410400.0539956
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.0201351000.0253098
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode000.006819690.0166051
CAR5Developing grain, bracts removed (5 DPA)23.561440.551721.541732.443
CAR15Developing grain, bracts removed (15 DPA)00.020340400.0777763



CDS Structure of MLOC_63480






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63480.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376200NoneNoneNoneNone
MLOC_63480.1CUST_18276_PI427708080AvailableAvailablecontig_47626 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g35650.1 -2 0.0 527 325/528 (62%) 13106.m03681 protein reticuline oxidase-like protein precursor, putative, expressed
TAIR PP10 AT5G44410.1 -2 3e-108 339 226/506 (45%) FAD-binding Berberine family protein | chr5:17891246-17892853 REVERSE LENGTH=535