- Predicted Gene MLOC_63428
MLOC_63428 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_63428_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_63428_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 28.2176 | 24.4195 | 23.6229 | 26.9461 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 19.7304 | 8.3875 | 9.57124 | 11.7581 |
INF1 | Young developing inflorescences (5mm) | 24.1719 | 25.4252 | 30.7836 | 22.6635 |
INF2 | Developing inflorescences (1-1.5 cm) | 21.9587 | 25.5435 | 24.2722 | 27.436 |
ROO | Roots from the seedlings (10 cm shoot stage) | 11.2973 | 17.7262 | 13.4853 | 22.9143 |
NOD | Developing tillers at six leaf stage, 3rd internode | 26.6128 | 39.7513 | 31.61 | 142.15 |
CAR5 | Developing grain, bracts removed (5 DPA) | 21.1372 | 19.5268 | 19.8133 | 20.7586 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.15756 | 3.5301 | 3.58754 | 8.02311 |
CDS Structure of MLOC_63428
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_63428.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g61860.2 |
+3 |
1e-86 |
282 |
170/217 (78%) |
13101.m06608 protein TBC domain containing protein, expressed |
TAIR PP10 |
AT2G37290.1 |
+3 |
5e-33 |
132 |
76/159 (48%) |
Ypt/Rab-GAP domain of gyp1p superfamily protein | chr2:15656935-15661335 REVERSE LENGTH=882 |