MLOC_63428 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains28.217624.419523.622926.9461
LEAShoots from the seedlings (10 cm shoot stage)19.73048.38759.5712411.7581
INF1Young developing inflorescences (5mm)24.171925.425230.783622.6635
INF2Developing inflorescences (1-1.5 cm)21.958725.543524.272227.436
ROORoots from the seedlings (10 cm shoot stage)11.297317.726213.485322.9143
NODDeveloping tillers at six leaf stage, 3rd internode26.612839.751331.61142.15
CAR5Developing grain, bracts removed (5 DPA)21.137219.526819.813320.7586
CAR15Developing grain, bracts removed (15 DPA)3.157563.53013.587548.02311



CDS Structure of MLOC_63428






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63428.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_63428.1CUST_8602_PI427708083AvailableAvailablecontig_47583 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g61860.2 +3 1e-86 282 170/217 (78%) 13101.m06608 protein TBC domain containing protein, expressed
TAIR PP10 AT2G37290.1 +3 5e-33 132 76/159 (48%) Ypt/Rab-GAP domain of gyp1p superfamily protein | chr2:15656935-15661335 REVERSE LENGTH=882