MLOC_6342 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_6342_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_6342_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 15.0702 | 13.3215 | 13.0546 | 13.1757 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 12.5834 | 9.61058 | 10.9874 | 9.66185 |
INF1 | Young developing inflorescences (5mm) | 20.3547 | 20.7071 | 20.3202 | 16.7535 |
INF2 | Developing inflorescences (1-1.5 cm) | 14.4777 | 16.5587 | 14.7079 | 16.3443 |
ROO | Roots from the seedlings (10 cm shoot stage) | 13.0466 | 12.8236 | 13.1951 | 15.2968 |
NOD | Developing tillers at six leaf stage, 3rd internode | 8.54861 | 18.4501 | 17.1338 | 51.3972 |
CAR5 | Developing grain, bracts removed (5 DPA) | 12.5509 | 13.3814 | 14.7548 | 12.9723 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.21676 | 4.20717 | 3.92388 | 9.37924 |
CDS Structure of MLOC_6342
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6342.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g46150.1 |
-2 |
0.0 |
546 |
258/284 (91%) |
13102.m05178 protein GAMM1 protein-like, putative, expressed |
TAIR PP10 |
AT5G41970.1 |
-2 |
4e-156 |
467 |
217/282 (77%) |
Metal-dependent protein hydrolase | chr5:16791198-16792961 FORWARD LENGTH=373 |