MLOC_6341 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.49647 | 3.45152 | 3.90805 | 3.14192 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.48512 | 5.11964 | 5.13466 | 4.29737 |
INF1 | Young developing inflorescences (5mm) | 0.789667 | 0.994711 | 1.21799 | 0.759795 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.43716 | 1.54602 | 1.54381 | 1.53092 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.4192 | 6.25385 | 8.85774 | 6.07481 |
NOD | Developing tillers at six leaf stage, 3rd internode | 17.9304 | 8.16406 | 10.3034 | 26.1608 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.71378 | 4.17227 | 3.63625 | 3.18092 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.6104 | 1.76326 | 1.73277 | 3.3818 |
CDS Structure of MLOC_6341
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6341.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g46140.2 |
+1 |
2e-73 |
245 |
117/152 (77%) |
13102.m05177 protein OsFBX59 - F-box domain containing protein, expressed |
TAIR PP10 |
AT5G41970.1 |
-2 |
9e-30 |
124 |
56/73 (77%) |
Metal-dependent protein hydrolase | chr5:16791198-16792961 FORWARD LENGTH=373 |