MLOC_6341 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.496473.451523.908053.14192
LEAShoots from the seedlings (10 cm shoot stage)7.485125.119645.134664.29737
INF1Young developing inflorescences (5mm)0.7896670.9947111.217990.759795
INF2Developing inflorescences (1-1.5 cm)1.437161.546021.543811.53092
ROORoots from the seedlings (10 cm shoot stage)4.41926.253858.857746.07481
NODDeveloping tillers at six leaf stage, 3rd internode17.93048.1640610.303426.1608
CAR5Developing grain, bracts removed (5 DPA)3.713784.172273.636253.18092
CAR15Developing grain, bracts removed (15 DPA)1.61041.763261.732773.3818



CDS Structure of MLOC_6341






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_6341.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249234.1NoneNoneNoneNone
MLOC_6341.1CUST_18274_PI427708080AvailableAvailablecontig_137399 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g46140.2 +1 2e-73 245 117/152 (77%) 13102.m05177 protein OsFBX59 - F-box domain containing protein, expressed
TAIR PP10 AT5G41970.1 -2 9e-30 124 56/73 (77%) Metal-dependent protein hydrolase | chr5:16791198-16792961 FORWARD LENGTH=373