MLOC_63376 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.650736.343187.890226.6493
LEAShoots from the seedlings (10 cm shoot stage)9.182667.954412.9798.28288
INF1Young developing inflorescences (5mm)10.72389.601629.347838.16109
INF2Developing inflorescences (1-1.5 cm)11.751911.335911.970612.7046
ROORoots from the seedlings (10 cm shoot stage)12.098312.75718.7737514.0837
NODDeveloping tillers at six leaf stage, 3rd internode6.044815.769833.8262616.5338
CAR5Developing grain, bracts removed (5 DPA)3.222672.610382.430682.70851
CAR15Developing grain, bracts removed (15 DPA)1.150790.9418160.985822.33048



CDS Structure of MLOC_63376






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63376.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354790NoneNoneNoneNone
MLOC_63376.1CUST_18273_PI427708080AvailableAvailablecontig_47528 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g60700.1 -2 0.0 827 459/545 (84%) 13101.m06460 protein serine/threonine-protein kinase NAK, putative, expressed
TAIR PP10 AT3G08760.1 -2 3e-152 459 283/532 (53%) | Symbols: ATSIK | Protein kinase superfamily protein | chr3:2658129-2659984 REVERSE LENGTH=557