MLOC_63374 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0.0199029000.0189124
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.0210740.0097019400.0224483
ROORoots from the seedlings (10 cm shoot stage)00.02697540.03555970.0576862
NODDeveloping tillers at six leaf stage, 3rd internode0.01784790.02130170.006876030.0693274
CAR5Developing grain, bracts removed (5 DPA)24.034924.444825.033928.3382
CAR15Developing grain, bracts removed (15 DPA)38.141835.802434.954498.869



CDS Structure of MLOC_63374






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63374.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376984NoneNoneNoneNone
MLOC_63374.1CUST_18272_PI427708080AvailableAvailablecontig_47526 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g33420.1 -3 9e-60 219 146/334 (44%) 13108.m03482 protein agenet domain containing protein, expressed
TAIR PP10 AT1G68580.1 -3 3e-30 125 65/153 (42%) agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein | chr1:25753582-25755059 FORWARD LENGTH=396