MLOC_63373 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.254231.433661.569742.15686
LEAShoots from the seedlings (10 cm shoot stage)0.7470790.9951262.213191.31141
INF1Young developing inflorescences (5mm)0.1079980.12150100.125709
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)1.885242.424381.861463.33755
NODDeveloping tillers at six leaf stage, 3rd internode2.000995.309943.3828116.6685
CAR5Developing grain, bracts removed (5 DPA)0.2716830.3803130.5966320.525718
CAR15Developing grain, bracts removed (15 DPA)0.05181540.059050100.20372



CDS Structure of MLOC_63373






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63373.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_63373.2CUST_14545_PI427708080AvailableAvailablecontig_47526 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g24310.1 -3 2e-36 134 66/74 (89%) 13109.m02307 protein expressed protein
TAIR PP10 AT3G25855.1 -3 4e-17 75 29/69 (42%) Copper transport protein family | chr3:9459608-9460267 REVERSE LENGTH=112