MLOC_63372 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.868486.701557.701137.38262
LEAShoots from the seedlings (10 cm shoot stage)9.9889319.371321.138514.0808
INF1Young developing inflorescences (5mm)3.352993.714993.232553.1013
INF2Developing inflorescences (1-1.5 cm)2.431573.361484.233833.76209
ROORoots from the seedlings (10 cm shoot stage)7.877516.485496.117867.79194
NODDeveloping tillers at six leaf stage, 3rd internode8.598858.909779.4444727.9726
CAR5Developing grain, bracts removed (5 DPA)10.875712.663114.718313.1021
CAR15Developing grain, bracts removed (15 DPA)2.939623.293572.703387.65049



CDS Structure of MLOC_63372






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63372.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354103NoneNoneNoneNone
MLOC_63372.1CUST_4787_PI427708080AvailableAvailablecontig_47526 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g24320.1 +1 0.0 592 370/490 (76%) 13109.m02308 protein 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed
TAIR PP10 AT3G25860.1 +1 5e-174 507 289/432 (67%) | Symbols: LTA2, PLE2 | 2-oxoacid dehydrogenases acyltransferase family protein | chr3:9460632-9462585 FORWARD LENGTH=480