MLOC_63365 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.56849.159649.572539.80966
LEAShoots from the seedlings (10 cm shoot stage)10.64814.021077.801336.15376
INF1Young developing inflorescences (5mm)8.442048.20547.975396.6205
INF2Developing inflorescences (1-1.5 cm)8.257149.547468.455599.00868
ROORoots from the seedlings (10 cm shoot stage)11.727711.16838.6678311.9789
NODDeveloping tillers at six leaf stage, 3rd internode13.386620.716410.773753.5534
CAR5Developing grain, bracts removed (5 DPA)11.726611.972513.337710.9847
CAR15Developing grain, bracts removed (15 DPA)3.508293.434822.906187.37203



CDS Structure of MLOC_63365






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63365.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_63365.1CUST_12922_PI427708083AvailableAvailablecontig_47518 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g46510.2 -3 8e-45 176 123/159 (77%) 13101.m04781 protein peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed
TAIR PP10 AT5G24710.1 -3 4e-14 77 63/158 (40%) Transducin/WD40 repeat-like superfamily protein | chr5:8459148-8467920 REVERSE LENGTH=1377