MLOC_63333 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.596512.267112.447110.8496
LEAShoots from the seedlings (10 cm shoot stage)7.924847.391718.218855.95094
INF1Young developing inflorescences (5mm)14.179913.76215.496610.6972
INF2Developing inflorescences (1-1.5 cm)11.949211.32313.315211.1846
ROORoots from the seedlings (10 cm shoot stage)12.509810.981812.147511.5892
NODDeveloping tillers at six leaf stage, 3rd internode8.669647.67078.4490321.5986
CAR5Developing grain, bracts removed (5 DPA)9.5508510.84669.501388.08866
CAR15Developing grain, bracts removed (15 DPA)4.481044.086293.961498.30086



CDS Structure of MLOC_63333






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63333.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363048NoneNoneNoneNone
MLOC_63333.1NoneAvailableAvailablecontig_47494 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g61330.2 -3 5e-123 386 195/214 (91%) 13103.m06756 protein fumarylacetoacetase, putative, expressed
TAIR PP10 AT4G15940.1 -3 2e-97 313 158/213 (74%) Fumarylacetoacetate (FAA) hydrolase family | chr4:9038361-9040163 FORWARD LENGTH=222