MLOC_63319 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.76989.5592210.469711.0835
LEAShoots from the seedlings (10 cm shoot stage)11.200212.55368.5279.46491
INF1Young developing inflorescences (5mm)18.828518.850520.215817.541
INF2Developing inflorescences (1-1.5 cm)36.40223.895228.920633.8923
ROORoots from the seedlings (10 cm shoot stage)17.152116.854317.013221.5874
NODDeveloping tillers at six leaf stage, 3rd internode8.296948.458378.2657228.5016
CAR5Developing grain, bracts removed (5 DPA)12.47712.033513.572713.274
CAR15Developing grain, bracts removed (15 DPA)13.624313.149313.166232.9961



CDS Structure of MLOC_63319






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63319.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252496.1NoneNoneNoneNone
MLOC_63319.1CUST_4781_PI427708080AvailableAvailablecontig_47487 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g09840.2 +1 6e-172 496 261/398 (66%) 13103.m01092 protein C2 domain containing protein, putative, expressed
TAIR PP10 AT5G55530.2 +1 7e-103 318 178/378 (47%) Calcium-dependent lipid-binding (CaLB domain) family protein | chr5:22494439-22495656 FORWARD LENGTH=405