MLOC_63302 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.3636610.060410.86299.84939
LEAShoots from the seedlings (10 cm shoot stage)22.436950.752272.279940.0889
INF1Young developing inflorescences (5mm)1.52721.920591.61141.45236
INF2Developing inflorescences (1-1.5 cm)1.976492.23963.155682.50353
ROORoots from the seedlings (10 cm shoot stage)1.525272.108372.889182.43797
NODDeveloping tillers at six leaf stage, 3rd internode0.136820.1262410.2344480.469979
CAR5Developing grain, bracts removed (5 DPA)11.288412.884413.865111.531
CAR15Developing grain, bracts removed (15 DPA)13.669313.696711.22728.6054



CDS Structure of MLOC_63302






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63302.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376855NoneNoneNoneNone
MLOC_63302.1CUST_4779_PI427708080AvailableAvailablecontig_47467 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g04240.1 -2 0.0 1119 591/630 (94%) 13107.m00363 protein succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed
TAIR PP10 AT5G66760.1 -2 0.0 1070 548/590 (93%) | Symbols: SDH1-1 | succinate dehydrogenase 1-1 | chr5:26653776-26657224 FORWARD LENGTH=634