MLOC_63301 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9268381.867161.505641.33484
LEAShoots from the seedlings (10 cm shoot stage)5.160943.958334.148173.30159
INF1Young developing inflorescences (5mm)3.57913.636533.553432.5957
INF2Developing inflorescences (1-1.5 cm)3.872913.864833.684213.6859
ROORoots from the seedlings (10 cm shoot stage)0.1835620.5734460.6828740.52137
NODDeveloping tillers at six leaf stage, 3rd internode0.3119480.2820180.7647061.03342
CAR5Developing grain, bracts removed (5 DPA)1.419161.624631.459811.25393
CAR15Developing grain, bracts removed (15 DPA)0.4131750.3388870.4344340.789055



CDS Structure of MLOC_63301






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63301.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355862NoneNoneNoneNone
MLOC_63301.1CUST_4778_PI427708080AvailableAvailablecontig_47467 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g04230.1 +2 0.0 801 437/563 (78%) 13107.m00362 protein mTERF domain containing protein, expressed
TAIR PP10 AT2G21710.1 +2 2e-177 550 270/447 (60%) | Symbols: EMB2219 | Mitochondrial transcription termination factor family protein | chr2:9270886-9273307 FORWARD LENGTH=641