- Predicted Gene MLOC_63301
MLOC_63301 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.926838 | 1.86716 | 1.50564 | 1.33484 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.16094 | 3.95833 | 4.14817 | 3.30159 |
INF1 | Young developing inflorescences (5mm) | 3.5791 | 3.63653 | 3.55343 | 2.5957 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.87291 | 3.86483 | 3.68421 | 3.6859 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.183562 | 0.573446 | 0.682874 | 0.52137 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.311948 | 0.282018 | 0.764706 | 1.03342 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.41916 | 1.62463 | 1.45981 | 1.25393 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.413175 | 0.338887 | 0.434434 | 0.789055 |
CDS Structure of MLOC_63301
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_63301.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g04230.1 |
+2 |
0.0 |
801 |
437/563 (78%) |
13107.m00362 protein mTERF domain containing protein, expressed |
TAIR PP10 |
AT2G21710.1 |
+2 |
2e-177 |
550 |
270/447 (60%) |
| Symbols: EMB2219 | Mitochondrial transcription termination factor family protein | chr2:9270886-9273307 FORWARD LENGTH=641 |