MLOC_63300 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.18934.966345.425465.1526
LEAShoots from the seedlings (10 cm shoot stage)2.67522.637393.316132.54168
INF1Young developing inflorescences (5mm)3.596993.621584.172223.3306
INF2Developing inflorescences (1-1.5 cm)3.821254.304484.278444.74689
ROORoots from the seedlings (10 cm shoot stage)2.987264.03333.442984.80456
NODDeveloping tillers at six leaf stage, 3rd internode1.260452.110532.130676.987
CAR5Developing grain, bracts removed (5 DPA)2.095142.656091.854912.31326
CAR15Developing grain, bracts removed (15 DPA)0.6022570.6340320.6916781.54521



CDS Structure of MLOC_63300






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63300.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363656NoneNoneNoneNone
MLOC_63300.1CUST_4777_PI427708080AvailableAvailablecontig_47467 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g04220.1 +2 0.0 957 556/744 (75%) 13107.m00361 protein wound and phytochrome signaling involved receptor like kinase, putative, expressed
TAIR PP10 AT2G16250.1 +2 4e-117 382 245/594 (41%) Leucine-rich repeat protein kinase family protein | chr2:7039682-7042933 REVERSE LENGTH=915