MLOC_63275 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains24.751619.836819.049723.245
LEAShoots from the seedlings (10 cm shoot stage)2.324997.376438.750335.98282
INF1Young developing inflorescences (5mm)2.175273.904581.115462.50262
INF2Developing inflorescences (1-1.5 cm)0.3725520.116960.07628070.235465
ROORoots from the seedlings (10 cm shoot stage)18.32578.8665512.694313.322
NODDeveloping tillers at six leaf stage, 3rd internode0.4158530.6131020.1222931.59599
CAR5Developing grain, bracts removed (5 DPA)3.847922.688881.991063.19365
CAR15Developing grain, bracts removed (15 DPA)2.672354.093770.8255747.76062



CDS Structure of MLOC_63275






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63275.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355055NoneNoneNoneNone
MLOC_63275.3CUST_4773_PI427708080AvailableAvailablecontig_47446 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g13300.1 -3 0.0 902 444/496 (90%) 13103.m01542 protein glutamate decarboxylase, putative, expressed
TAIR PP10 AT5G17330.1 -3 0.0 834 409/502 (81%) | Symbols: GAD, GAD1 | glutamate decarboxylase | chr5:5711141-5714839 FORWARD LENGTH=502