MLOC_63274 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)00.1662020.08940990.161333
INF1Young developing inflorescences (5mm)00.080156600.0990511
INF2Developing inflorescences (1-1.5 cm)0.03756050.03666080.04453360.0478178
ROORoots from the seedlings (10 cm shoot stage)0.211971000.143842
NODDeveloping tillers at six leaf stage, 3rd internode00.0093923600.0662813
CAR5Developing grain, bracts removed (5 DPA)0.8927150.7669030.6088450.822794
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_63274






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63274.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_63274.1CUST_14532_PI427708080AvailableAvailablecontig_47446 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g13310.1 -1 4e-51 173 116/239 (49%) 13103.m01543 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT5G67300.1 -1 4e-35 132 81/201 (40%) | Symbols: ATMYBR1, ATMYB44, MYBR1, MYB44 | myb domain protein r1 | chr5:26854109-26855026 FORWARD LENGTH=305