- Predicted Gene MLOC_63252
MLOC_63252 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_63252_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.91079 | 9.30692 | 8.35576 | 8.49361 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 11.2468 | 10.059 | 13.2513 | 9.25508 |
INF1 | Young developing inflorescences (5mm) | 20.5129 | 19.6843 | 17.4965 | 16.2692 |
INF2 | Developing inflorescences (1-1.5 cm) | 21.1237 | 18.7033 | 19.8254 | 21.9976 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.62254 | 8.3838 | 7.84861 | 8.93994 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.51615 | 4.93926 | 9.64527 | 16.758 |
CAR5 | Developing grain, bracts removed (5 DPA) | 11.7983 | 11.6641 | 12.8376 | 11.8775 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.89463 | 6.77998 | 5.93105 | 16.0037 |
CDS Structure of MLOC_63252
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_63252.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g13570.1 |
+2 |
0.0 |
747 |
420/650 (65%) |
13106.m01496 protein expressed protein |
TAIR PP10 |
AT1G53200.1 |
+2 |
6e-32 |
132 |
147/559 (26%) |
unknown protein; Has 21 Blast hits to 21 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:19840486-19843169 REVERSE LENGTH=613 |