MLOC_63252 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.910799.306928.355768.49361
LEAShoots from the seedlings (10 cm shoot stage)11.246810.05913.25139.25508
INF1Young developing inflorescences (5mm)20.512919.684317.496516.2692
INF2Developing inflorescences (1-1.5 cm)21.123718.703319.825421.9976
ROORoots from the seedlings (10 cm shoot stage)5.622548.38387.848618.93994
NODDeveloping tillers at six leaf stage, 3rd internode3.516154.939269.6452716.758
CAR5Developing grain, bracts removed (5 DPA)11.798311.664112.837611.8775
CAR15Developing grain, bracts removed (15 DPA)6.894636.779985.9310516.0037



CDS Structure of MLOC_63252






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63252.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368289NoneNoneNoneNone
MLOC_63252.1CUST_4769_PI427708080AvailableAvailablecontig_47432 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g13570.1 +2 0.0 747 420/650 (65%) 13106.m01496 protein expressed protein
TAIR PP10 AT1G53200.1 +2 6e-32 132 147/559 (26%) unknown protein; Has 21 Blast hits to 21 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:19840486-19843169 REVERSE LENGTH=613