- Predicted Gene MLOC_63249
MLOC_63249 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_63249_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_63249_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.0730938 | 0.0629523 | 0.18016 | 0.122334 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.11179 | 1.97066 | 3.02662 | 2.05054 |
INF1 | Young developing inflorescences (5mm) | 0.107725 | 0.150342 | 0.139905 | 0.130096 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.737431 | 0.831448 | 1.17925 | 1.12933 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.37393 | 1.93235 | 1.0154 | 2.86917 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0247479 | 0 | 0.0272391 | 0.0277628 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.62231 | 6.54892 | 6.31857 | 7.09143 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.16424 | 2.38072 | 1.03063 | 5.49517 |
CDS Structure of MLOC_63249
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_63249.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g13580.1 |
+1 |
2e-62 |
209 |
161/272 (59%) |
13106.m01497 protein expressed protein |
TAIR PP10 |
AT3G28370.1 |
+1 |
3e-29 |
116 |
89/227 (39%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51430.1); Has 6174 Blast hits to 4953 proteins in 685 species: Archae - 195; Bacteria - 792; Metazoa - 2688; Fungi - 653; Plants - 470; Viruses - 15; Other Eukaryotes - 1361 (source: NCBI BLink). | chr3:10620627-10623259 FORWARD LENGTH=292 |