- Predicted Gene MLOC_63245
MLOC_63245 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_63245_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_63245_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 5.28553 | 8.25758 | 7.26331 | 7.2793 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 65.3929 | 177.773 | 86.7118 | 80.5766 |
INF1 | Young developing inflorescences (5mm) | 7.70822 | 8.17249 | 8.47958 | 6.19849 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.25112 | 3.87429 | 3.14249 | 4.10434 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.56053 | 4.66701 | 7.23283 | 3.8594 |
NOD | Developing tillers at six leaf stage, 3rd internode | 14.7312 | 6.33303 | 3.48588 | 24.4786 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.85027 | 4.52044 | 3.83372 | 4.70774 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.877935 | 1.01783 | 0.642045 | 1.73301 |
CDS Structure of MLOC_63245
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_63245.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g41696.1 |
+3 |
3e-19 |
82 |
38/41 (93%) |
13110.m07778 protein photosystem II reaction center protein K precursor, putative, expressed |
TAIR PP10 |
ATCG00080.1 |
+1 |
1e-17 |
76 |
36/36 (100%) |
| Symbols: PSBI | photosystem II reaction center protein I | chrC:7583-7693 FORWARD LENGTH=36 |