MLOC_63245 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.285538.257587.263317.2793
LEAShoots from the seedlings (10 cm shoot stage)65.3929177.77386.711880.5766
INF1Young developing inflorescences (5mm)7.708228.172498.479586.19849
INF2Developing inflorescences (1-1.5 cm)3.251123.874293.142494.10434
ROORoots from the seedlings (10 cm shoot stage)1.560534.667017.232833.8594
NODDeveloping tillers at six leaf stage, 3rd internode14.73126.333033.4858824.4786
CAR5Developing grain, bracts removed (5 DPA)4.850274.520443.833724.70774
CAR15Developing grain, bracts removed (15 DPA)0.8779351.017830.6420451.73301



CDS Structure of MLOC_63245






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63245.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_63245.1CUST_8585_PI427708083AvailableAvailablecontig_474280 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g41696.1 +3 3e-19 82 38/41 (93%) 13110.m07778 protein photosystem II reaction center protein K precursor, putative, expressed
TAIR PP10 ATCG00080.1 +1 1e-17 76 36/36 (100%) | Symbols: PSBI | photosystem II reaction center protein I | chrC:7583-7693 FORWARD LENGTH=36