MLOC_63204 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.814923.299123.128622.651
LEAShoots from the seedlings (10 cm shoot stage)15.39644.223445.113047.52841
INF1Young developing inflorescences (5mm)11.27069.550078.226628.57908
INF2Developing inflorescences (1-1.5 cm)7.6824810.2749.1034110.8035
ROORoots from the seedlings (10 cm shoot stage)9.6332819.369213.723.1016
NODDeveloping tillers at six leaf stage, 3rd internode35.171932.758122.3514108.292
CAR5Developing grain, bracts removed (5 DPA)3.902623.964343.399323.97297
CAR15Developing grain, bracts removed (15 DPA)0.6956540.7206070.7031791.73475



CDS Structure of MLOC_63204






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63204.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362398NoneNoneNoneNone
MLOC_63204.1CUST_4763_PI427708080AvailableAvailablecontig_47379 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g18980.1 +3 0.0 1456 820/1024 (80%) 13103.m02270 protein kinesin motor domain containing protein, expressed
TAIR PP10 AT2G47500.1 +3 0.0 956 575/1008 (57%) P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain | chr2:19493247-19497882 FORWARD LENGTH=983