MLOC_6320 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.317185.491544.132363.74781
LEAShoots from the seedlings (10 cm shoot stage)3.256631.262261.929181.68112
INF1Young developing inflorescences (5mm)11.671711.8858.297178.00663
INF2Developing inflorescences (1-1.5 cm)8.4072710.21098.483828.91025
ROORoots from the seedlings (10 cm shoot stage)4.344654.838555.623664.51543
NODDeveloping tillers at six leaf stage, 3rd internode0.3824120.5373860.9509041.54863
CAR5Developing grain, bracts removed (5 DPA)0.9755811.310911.621951.11006
CAR15Developing grain, bracts removed (15 DPA)1.059430.7645430.3839411.70575



CDS Structure of MLOC_6320






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK372883
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372883CUST_22411_PI427708080NoneNoneNone
MLOC_33029.1NoneAvailableNonecontig_233910 (Mapped)
MLOC_3325.1NoneAvailableNonecontig_129768 (Mapped)
MLOC_35076.1NoneAvailableNonecontig_245530 (Mapped)
MLOC_47389.1NoneAvailableNonecontig_305169 (Mapped)
MLOC_6320.2NoneAvailableAvailablecontig_137376 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----