MLOC_63155 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.313523.151773.147682.49558
LEAShoots from the seedlings (10 cm shoot stage)18.414220.276718.935314.4316
INF1Young developing inflorescences (5mm)4.599313.61534.20053.12723
INF2Developing inflorescences (1-1.5 cm)2.303892.534873.502962.53453
ROORoots from the seedlings (10 cm shoot stage)0.4772780.6907711.379640.725872
NODDeveloping tillers at six leaf stage, 3rd internode5.443775.213638.372916.0046
CAR5Developing grain, bracts removed (5 DPA)4.925164.52575.415734.12485
CAR15Developing grain, bracts removed (15 DPA)0.6207420.8996210.8441951.55162



CDS Structure of MLOC_63155






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63155.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250622.1NoneNoneNoneNone
MLOC_63155.1CUST_4751_PI427708080AvailableAvailablecontig_47335 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g39740.1 +2 3e-162 501 321/376 (85%) 13102.m04413 protein psaB translation factor, putative, expressed
TAIR PP10 AT3G08010.1 +2 1e-117 378 200/293 (68%) | Symbols: ATAB2 | RNA binding | chr3:2556046-2557426 FORWARD LENGTH=374