MLOC_63137 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.832930.4277190.3169410.467122
LEAShoots from the seedlings (10 cm shoot stage)3.131672.023650.7746041.47823
INF1Young developing inflorescences (5mm)4.725716.8247613.96596.91458
INF2Developing inflorescences (1-1.5 cm)14.135210.224317.45214.1345
ROORoots from the seedlings (10 cm shoot stage)2.828151.183021.70951.41689
NODDeveloping tillers at six leaf stage, 3rd internode2.7976610.20542.0831920.0258
CAR5Developing grain, bracts removed (5 DPA)0.4509250.2695720.1649590.283331
CAR15Developing grain, bracts removed (15 DPA)0.458680.3420130.1772090.840321



CDS Structure of MLOC_63137






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63137.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_63137.1CUST_8569_PI427708083AvailableAvailablecontig_47305 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g44090.1 -3 6e-31 116 75/119 (63%) 13102.m04905 protein zinc finger protein, putative, expressed
TAIR PP10 AT1G02070.1 -3 1e-20 87 60/136 (44%) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60520.1); Has 98 Blast hits to 98 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:370445-370947 REVERSE LENGTH=131