MLOC_63134 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains741.379452.692448.672570.039
LEAShoots from the seedlings (10 cm shoot stage)229.091130.165183.811164.159
INF1Young developing inflorescences (5mm)688.821684.246709.021657.061
INF2Developing inflorescences (1-1.5 cm)546.939477.517556.444644.651
ROORoots from the seedlings (10 cm shoot stage)456.897414.713440.936575.897
NODDeveloping tillers at six leaf stage, 3rd internode32.853539.38887.9857175.747
CAR5Developing grain, bracts removed (5 DPA)378.57394.59354.423431.6
CAR15Developing grain, bracts removed (15 DPA)105.294103.53292.0581263.593



CDS Structure of MLOC_63134






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63134.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360917NoneNoneNoneNone
MLOC_63134.2CUST_4746_PI427708080AvailableAvailablecontig_47300 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g37862.1 -1 9e-130 374 201/219 (92%) 13102.m04150 protein 60S ribosomal protein L6, putative, expressed
TAIR PP10 AT1G74050.1 -1 7e-91 275 144/215 (67%) Ribosomal protein L6 family protein | chr1:27847256-27848680 REVERSE LENGTH=233