- Predicted Gene MLOC_63125
MLOC_63125 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 124.904 | 98.6147 | 108.428 | 95.5814 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 26.6074 | 40.6539 | 23.8769 | 22.1038 |
| INF1 | Young developing inflorescences (5mm) | 0.386525 | 0.0862564 | 0.143107 | 0.174806 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.155615 | 0 | 0 | 0.193372 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 493.36 | 311.235 | 371.763 | 338.912 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.79738 | 4.84195 | 39.9774 | 29.733 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.0980592 | 0 | 0.190407 | 0.135537 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.0394452 | 0.0504481 | 0.166451 |
CDS Structure of MLOC_63125
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_63125.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g11500.1 |
+1 |
2e-93 |
283 |
134/176 (76%) |
13110.m01042 protein SCP-like extracellular protein, expressed |
| TAIR PP10 |
AT5G57625.1 |
+1 |
9e-54 |
181 |
75/133 (56%) |
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein | chr5:23337865-23338577 FORWARD LENGTH=207 |
