MLOC_63121 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.0665831000.0371495
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.03627540.03361600.038713
CAR15Developing grain, bracts removed (15 DPA)19.573922.324723.482252.4848



CDS Structure of MLOC_63121






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63121.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_63121.1CUST_14520_PI427708080AvailableAvailablecontig_47289 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g29840.1 -2 4e-70 229 116/200 (58%) 13101.m03094 protein no apical meristem protein, putative, expressed
TAIR PP10 AT5G61430.1 -2 2e-67 221 110/190 (58%) | Symbols: ANAC100, ATNAC5, NAC100 | NAC domain containing protein 100 | chr5:24701328-24702553 REVERSE LENGTH=336