- Predicted Gene MLOC_63120
MLOC_63120 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 9.56332 | 8.51818 | 8.70431 | 8.74792 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.6254 | 4.25831 | 6.23044 | 5.37491 |
INF1 | Young developing inflorescences (5mm) | 5.80203 | 6.50177 | 5.77014 | 4.94928 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.73531 | 6.35086 | 6.52963 | 6.57803 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.47978 | 9.48187 | 9.23122 | 11.083 |
NOD | Developing tillers at six leaf stage, 3rd internode | 9.84978 | 11.1928 | 8.57879 | 37.4459 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.07211 | 6.27968 | 7.84638 | 6.93601 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.19326 | 4.03602 | 3.50982 | 8.77767 |
CDS Structure of MLOC_63120
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_63120.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g23440.1 |
+3 |
0.0 |
708 |
386/420 (92%) |
13108.m02401 protein amino acid permease family protein, putative, expressed |
TAIR PP10 |
AT1G30450.2 |
+3 |
0.0 |
631 |
345/421 (82%) |
| Symbols: CCC1, ATCCC1, HAP5 | cation-chloride co-transporter 1 | chr1:10762905-10769061 FORWARD LENGTH=975 |