MLOC_63120 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.563328.518188.704318.74792
LEAShoots from the seedlings (10 cm shoot stage)7.62544.258316.230445.37491
INF1Young developing inflorescences (5mm)5.802036.501775.770144.94928
INF2Developing inflorescences (1-1.5 cm)5.735316.350866.529636.57803
ROORoots from the seedlings (10 cm shoot stage)6.479789.481879.2312211.083
NODDeveloping tillers at six leaf stage, 3rd internode9.8497811.19288.5787937.4459
CAR5Developing grain, bracts removed (5 DPA)8.072116.279687.846386.93601
CAR15Developing grain, bracts removed (15 DPA)4.193264.036023.509828.77767



CDS Structure of MLOC_63120






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63120.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_63120.1CUST_14519_PI427708080AvailableAvailablecontig_47288 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g23440.1 +3 0.0 708 386/420 (92%) 13108.m02401 protein amino acid permease family protein, putative, expressed
TAIR PP10 AT1G30450.2 +3 0.0 631 345/421 (82%) | Symbols: CCC1, ATCCC1, HAP5 | cation-chloride co-transporter 1 | chr1:10762905-10769061 FORWARD LENGTH=975