MLOC_63119 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.4521210.894811.43679.31042
LEAShoots from the seedlings (10 cm shoot stage)15.549810.186210.787910.1465
INF1Young developing inflorescences (5mm)13.259313.553416.265510.9567
INF2Developing inflorescences (1-1.5 cm)26.122923.507524.522324.7169
ROORoots from the seedlings (10 cm shoot stage)7.9690911.655511.860312.6259
NODDeveloping tillers at six leaf stage, 3rd internode11.711912.201111.978538.9626
CAR5Developing grain, bracts removed (5 DPA)18.75218.271917.305816.2472
CAR15Developing grain, bracts removed (15 DPA)15.834715.674616.997633.5838



CDS Structure of MLOC_63119






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63119.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252905.1NoneNoneNoneNone
MLOC_63119.1CUST_4743_PI427708080AvailableAvailablecontig_47286 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g10850.1 -2 4e-103 332 186/206 (90%) 13109.m00960 protein meiotic coiled-coil protein 7, putative, expressed
TAIR PP10 AT4G29170.1 -2 1e-82 274 151/206 (73%) | Symbols: ATMND1 | Mnd1 family protein | chr4:14382985-14385128 FORWARD LENGTH=230