MLOC_6311 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.409623.070554.048023.78342
LEAShoots from the seedlings (10 cm shoot stage)3.410283.23814.239343.17075
INF1Young developing inflorescences (5mm)2.637492.637633.688732.65353
INF2Developing inflorescences (1-1.5 cm)3.803723.631414.150684.38566
ROORoots from the seedlings (10 cm shoot stage)7.321545.670084.662097.06556
NODDeveloping tillers at six leaf stage, 3rd internode4.53576.082168.804422.3586
CAR5Developing grain, bracts removed (5 DPA)3.820833.496273.445983.70866
CAR15Developing grain, bracts removed (15 DPA)3.047182.597832.144676.63048



CDS Structure of MLOC_6311






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_6311.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252389.1NoneNoneNoneNone
MLOC_6311.3CUST_18269_PI427708080AvailableAvailablecontig_47233 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g01760.1 -3 0.0 559 316/378 (84%) 13103.m00110 protein exostosin family domain containing protein, expressed
TAIR PP10 AT2G28110.1 -3 2e-141 421 224/353 (63%) | Symbols: FRA8, IRX7 | Exostosin family protein | chr2:11978024-11979641 REVERSE LENGTH=448