MLOC_63104 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains115.709134.288135.018143.218
LEAShoots from the seedlings (10 cm shoot stage)51.584943.242838.764541.5129
INF1Young developing inflorescences (5mm)24.221925.795423.612822.0882
INF2Developing inflorescences (1-1.5 cm)26.736328.246826.583431.9141
ROORoots from the seedlings (10 cm shoot stage)63.597293.488480.7556120.233
NODDeveloping tillers at six leaf stage, 3rd internode46.602628.633315.596197.0574
CAR5Developing grain, bracts removed (5 DPA)44.757942.3646.234546.875
CAR15Developing grain, bracts removed (15 DPA)13.324913.555413.864632.6017



CDS Structure of MLOC_63104






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63104.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366115NoneNoneNoneNone
MLOC_63104.2CUST_18268_PI427708080AvailableAvailablecontig_47233 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g01630.5 -2 0.0 780 447/544 (82%) 13106.m00067 protein 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed
TAIR PP10 AT3G13930.1 -2 0.0 588 316/450 (70%) Dihydrolipoamide acetyltransferase, long form protein | chr3:4596240-4600143 FORWARD LENGTH=539