MLOC_63101 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.08237460.1078830.2243930.128375
LEAShoots from the seedlings (10 cm shoot stage)0.13452600.1111710.121233
INF1Young developing inflorescences (5mm)00.075252200.0669547
INF2Developing inflorescences (1-1.5 cm)0.1228970.1706610.2537070.180751
ROORoots from the seedlings (10 cm shoot stage)0.0685346000.0470573
NODDeveloping tillers at six leaf stage, 3rd internode0.06753220.1085080.09803460.373249
CAR5Developing grain, bracts removed (5 DPA)0.1464920.3279450.124860.209363
CAR15Developing grain, bracts removed (15 DPA)0.4965230.4615540.1825820.93664



CDS Structure of MLOC_63101






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63101.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_63101.1NoneAvailableAvailablecontig_47268 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g57060.1 +3 2e-129 218 112/189 (59%) 13104.m05954 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----