MLOC_6310 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 38.1146 | 30.3961 | 33.8562 | 34.3167 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.5841 | 14.1781 | 20.0404 | 13.8759 |
| INF1 | Young developing inflorescences (5mm) | 11.652 | 12.9172 | 13.9547 | 11.7236 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.31483 | 12.1729 | 12.0046 | 13.245 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 39.2355 | 21.5042 | 39.8925 | 31.6473 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 34.7616 | 29.8133 | 21.8984 | 82.4326 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 16.5477 | 22.3792 | 13.8513 | 19.9471 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.77322 | 2.86163 | 2.30149 | 7.16337 |
CDS Structure of MLOC_6310
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6310.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g01770.1 |
+2 |
5e-60 |
192 |
102/128 (80%) |
13103.m00111 protein rhodanese, putative, expressed |
| TAIR PP10 |
AT5G03455.1 |
+2 |
2e-40 |
141 |
70/128 (55%) |
| Symbols: CDC25, ARATH;CDC25, ACR2 | Rhodanese/Cell cycle control phosphatase superfamily protein | chr5:862592-863949 FORWARD LENGTH=146 |
