MLOC_63089 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains89.833295.1878120.876109.329
LEAShoots from the seedlings (10 cm shoot stage)4.702323.9815178.25770.9042
INF1Young developing inflorescences (5mm)42.222538.034270.410343.8448
INF2Developing inflorescences (1-1.5 cm)142.86467.1949178.727132.639
ROORoots from the seedlings (10 cm shoot stage)11.59636.899311.260142.2349
NODDeveloping tillers at six leaf stage, 3rd internode31.549166.76651.3382204.624
CAR5Developing grain, bracts removed (5 DPA)1.361631.07050.887651.1308
CAR15Developing grain, bracts removed (15 DPA)0.8480140.917990.5208841.9253



CDS Structure of MLOC_63089






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63089.10
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359770NoneNoneNoneNone
MLOC_63089.10CUST_4740_PI427708080AvailableAvailablecontig_47260 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g15420.1 -3 0.0 920 444/555 (80%) 13106.m01705 protein asparagine synthetase, putative, expressed
TAIR PP10 AT3G47340.1 -3 0.0 965 466/563 (83%) | Symbols: ASN1, DIN6, AT-ASN1 | glutamine-dependent asparagine synthase 1 | chr3:17438136-17441043 REVERSE LENGTH=584