MLOC_63077 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains176.237180.538164.444184.235
LEAShoots from the seedlings (10 cm shoot stage)69.525116.01317.557629.8446
INF1Young developing inflorescences (5mm)13.770115.068612.244812.7292
INF2Developing inflorescences (1-1.5 cm)8.468739.891069.2245110.8086
ROORoots from the seedlings (10 cm shoot stage)142.215135.16487.8094164.897
NODDeveloping tillers at six leaf stage, 3rd internode229.323155.94749.2738438.845
CAR5Developing grain, bracts removed (5 DPA)27.521829.797529.778530.3653
CAR15Developing grain, bracts removed (15 DPA)21.873420.285522.739952.8998



CDS Structure of MLOC_63077






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63077.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249771.1NoneNoneNoneNone
AK251778.1NoneNoneNoneNone
AK353877NoneNoneNoneNone
MLOC_63077.1CUST_4739_PI427708080AvailableAvailablecontig_472559 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g25690.1 -2 0.0 919 450/480 (94%) 13112.m02604 protein UDP-glucose 6-dehydrogenase, putative, expressed
TAIR PP10 AT5G15490.1 -2 0.0 879 427/480 (89%) UDP-glucose 6-dehydrogenase family protein | chr5:5027872-5029314 REVERSE LENGTH=480