MLOC_63062 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.443179.7966710.05859.33126
LEAShoots from the seedlings (10 cm shoot stage)8.243373.918024.127034.80222
INF1Young developing inflorescences (5mm)18.168218.538517.501915.2964
INF2Developing inflorescences (1-1.5 cm)17.245820.719116.635620.7192
ROORoots from the seedlings (10 cm shoot stage)2.974376.022775.931536.97907
NODDeveloping tillers at six leaf stage, 3rd internode7.2714510.478210.818535.751
CAR5Developing grain, bracts removed (5 DPA)6.902956.64386.800886.72867
CAR15Developing grain, bracts removed (15 DPA)1.509891.07451.78813.25856



CDS Structure of MLOC_63062






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63062.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361148NoneNoneNoneNone
MLOC_63062.2CUST_4736_PI427708080AvailableAvailablecontig_47238 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g61620.2 +2 0.0 928 576/886 (65%) 13103.m06786 protein expressed protein
TAIR PP10 AT5G26910.1 +2 1e-42 169 239/910 (26%) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G58650.1); Has 1322 Blast hits to 684 proteins in 162 species: Archae - 4; Bacteria - 497; Metazoa - 157; Fungi - 101; Plants - 155; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink). | chr5:9466169-9469523 REVERSE LENGTH=853