MLOC_63058 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.453088.372029.998189.58981
LEAShoots from the seedlings (10 cm shoot stage)9.9239910.739411.75999.29017
INF1Young developing inflorescences (5mm)8.442728.902598.55798.27855
INF2Developing inflorescences (1-1.5 cm)7.770149.71629.717611.2537
ROORoots from the seedlings (10 cm shoot stage)14.344615.664117.617219.559
NODDeveloping tillers at six leaf stage, 3rd internode16.571516.174120.572649.7532
CAR5Developing grain, bracts removed (5 DPA)20.139721.34622.313123.5313
CAR15Developing grain, bracts removed (15 DPA)2.368562.726352.693047.08454



CDS Structure of MLOC_63058






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63058.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250971.1NoneNoneNoneNone
MLOC_63058.1CUST_18267_PI427708080AvailableAvailablecontig_47233 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g09850.3 -2 1e-148 453 321/482 (67%) 13101.m01055 protein ZOS1-04 - C2H2 zinc finger protein, expressed
TAIR PP10 AT1G55110.1 -2 9e-91 299 144/201 (72%) | Symbols: AtIDD7, IDD7 | indeterminate(ID)-domain 7 | chr1:20560406-20562625 REVERSE LENGTH=455