MLOC_63045 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.5093910.641910.846910.2923
LEAShoots from the seedlings (10 cm shoot stage)50.996873.416267.707253.9531
INF1Young developing inflorescences (5mm)8.260157.030636.759456.3751
INF2Developing inflorescences (1-1.5 cm)8.202549.040529.263539.88358
ROORoots from the seedlings (10 cm shoot stage)7.942687.201568.51178.84221
NODDeveloping tillers at six leaf stage, 3rd internode64.68145.648765.5872161.1
CAR5Developing grain, bracts removed (5 DPA)16.344216.249415.938816.2144
CAR15Developing grain, bracts removed (15 DPA)3.565344.030493.670518.79761



CDS Structure of MLOC_63045






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63045.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252646.1NoneNoneNoneNone
MLOC_63045.1CUST_4735_PI427708080AvailableAvailablecontig_47225 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g01030.1 -2 0.0 781 384/422 (91%) 13107.m00003 protein glycosyl transferase, group 1 domain containing protein, expressed
TAIR PP10 AT5G01220.1 -2 0.0 680 330/428 (77%) | Symbols: SQD2 | sulfoquinovosyldiacylglycerol 2 | chr5:86907-89885 REVERSE LENGTH=510