MLOC_6300 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 46.2387 | 47.4641 | 49.4501 | 47.7763 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 41.4162 | 32.3281 | 25.6842 | 27.6576 |
| INF1 | Young developing inflorescences (5mm) | 56.5417 | 64.14 | 66.9592 | 50.8158 |
| INF2 | Developing inflorescences (1-1.5 cm) | 43.8909 | 50.8159 | 52.8801 | 53.2637 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 26.0081 | 50.674 | 58.3271 | 58.4929 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 86.6514 | 56.059 | 52.1995 | 190.337 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 38.433 | 42.1535 | 40.4734 | 39.6995 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 10.5807 | 9.86385 | 9.72863 | 22.6576 |
CDS Structure of MLOC_6300
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6300.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g39140.1 |
+3 |
3e-115 |
340 |
200/230 (87%) |
13111.m03859 protein thioredoxin domain-containing protein 9, putative, expressed |
| TAIR PP10 |
AT5G66410.1 |
+3 |
6e-98 |
295 |
173/230 (75%) |
| Symbols: PLP3b | phosducin-like protein 3 homolog | chr5:26519909-26521459 FORWARD LENGTH=230 |
